I have all different kinds of sequencing data (methylation, RNA_seq, ATAC, etc) for only one cancer cell line - no control !!!!!
In fact, I only have "beta value" for methylation, "FPKM" for RNA-seq, etc and no Fold change because there is no Control data.
Is there ANY possible way to integrate or analyze these data for just one cell line and report the characteristics of the cell line? - Any paper in this regards?