How can i know number of duplicated genes using Prokka or roary outputs
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3.8 years ago
elkassah96 • 0

Hello Biostar

Please i did annotation of bacteria strains susing Prokka and pan genome analysis using Roary what i want to know is how how can i knwo number of duplicated genes in each strain and where i can find this information ( prokka files or roary files , and in which file exactlly )

Thank you very much

Assembly genome alignment gene • 715 views
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Output files for Roary appear to be well described. Have you looked at that information?

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