summury control quality assembly the all genome sequencing
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2.6 years ago

At bioinformatics college,

I've assembled 145 genomes and I wanted to know about the different contigs quality control parameters. How can I get a tabular report of all genomes at once (Tab or csv). I know QUAST and Assembly-Stat, BBmap.but it gives a file for each genome.

Thanks to community. Best regards.

control-quality Assembly • 423 views
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Entering edit mode
2.6 years ago

MultiQC can parse the output of several different tools and collate them into one report

https://multiqc.info/

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