Entering edit mode
3.7 years ago
evelyn
▴
230
Hello,
I have created two files from WGCNA to Cytoscape export: node.txt and edge.txt node.txt:
nodeName altName nodeAttr[nodesPresent, ]
V510 NA grey
V580 NA tan
V640 NA lightcoral
edge.txt:
fromNode toNode weight direction fromAltName toAltName
V510 V580 0.11 undirected NA NA
V510 V590 0.94 undirected NA NA
V510 V860 0.79 undirected NA NA
I want to make a network figure representing relationships between the traits that are used in this analysis. It is my first time using Cytoscape and I could not find which of these two files to use for creating a trait network figure. Thank you for your help!