Recommended graph for proteins?
1
0
Entering edit mode
3.7 years ago

hello,

I want to plot my protein data (length and Serine amino acid percentage) into a feasible plot. Length ranges up to 300 aa.

My data (have 700 proteins)

Please recommend something.

Thankyou

r plot • 857 views
ADD COMMENT
0
Entering edit mode
3.7 years ago
Mensur Dlakic ★ 27k

How about a simple histogram showing a distribution of sizes?

enter image description here

ADD COMMENT
0
Entering edit mode

Thankyou, Mensur Dlakic

But it would be great if it can also include Serine percentage.

ADD REPLY
0
Entering edit mode

Serine composition can be presented in another histogram plot. If you are trying to show the correlation between protein sizes and serine percentage, a histogram of their ratios may be appropriate. Or a scatter plot with size on X and serine composition on Y. If your proteins have different amounts of serine compared to general proteins, you may want to show a histogram with both distributions in the same plot.

ADD REPLY
0
Entering edit mode

Thankyou Mensur Dlakic,

I'll try to make a scatter plot of both parameters.

ADD REPLY

Login before adding your answer.

Traffic: 2125 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6