Recommended graph for proteins?
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14 months ago

hello,

I want to plot my protein data (length and Serine amino acid percentage) into a feasible plot. Length ranges up to 300 aa.

My data (have 700 proteins)

Please recommend something.

Thankyou

r plot • 385 views
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14 months ago
Mensur Dlakic ★ 14k

How about a simple histogram showing a distribution of sizes?

enter image description here

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Thankyou, Mensur Dlakic

But it would be great if it can also include Serine percentage.

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Serine composition can be presented in another histogram plot. If you are trying to show the correlation between protein sizes and serine percentage, a histogram of their ratios may be appropriate. Or a scatter plot with size on X and serine composition on Y. If your proteins have different amounts of serine compared to general proteins, you may want to show a histogram with both distributions in the same plot.

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Thankyou Mensur Dlakic,

I'll try to make a scatter plot of both parameters.

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