I am having similar query Ids between regions. For small batches the stack overflow approach works fine but if I want to print with large list it ends up with different errors. such: "failed to load http resource", "Failed to load external entity". I am fixing one other error arise.
Is there a way either using vep, biomaRt of python based by which I can fetch details. Or can we loop the program in R to get output in small batches? I am using sscrofa as my reference. My data look like :
<chr> <start> <end> 1 10000 20000 1 25000 350000 . . . . . . . . . 1 1000000 1001000