Evaluate genome annotation quality
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4.2 years ago
firestar ★ 1.6k

If I have multiple annotations (gff/gtf files) for a genome, are there tools/metrics to evaluate which annotation is better?

annotation genome • 1.0k views
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4.2 years ago
hugo.avila ▴ 530

hey, maybe try BEACON and/or BUSCO i think one (or both) of then will do what you want.

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BUSCO is what I use at the moment and was wondering if there was something better. Something like AED scores. Thanks for BEACON. Never heard of that.

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