Finding common and different genes between species
0
0
Entering edit mode
4.3 years ago
Ric ▴ 440

Hi, We have two plants which one of them is the wild type. For each of them, I used the Scallop results with TransDecoder. How is possible to determine which are common and different genes between those two plants from Scallop/Transdecoder results?

Thank you in advance,

RNA-Seq gene annotation • 810 views
ADD COMMENT
0
Entering edit mode

Are these plants related? You may look at presence/absence variation tools. These are part of pangenome/transcriptome analysis methods. Here is one approach.

ADD REPLY

Login before adding your answer.

Traffic: 1028 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6