I am a phD student working in structural annotation of a genome of filamentous fungi. For predict genes, i used marker. Maker run very good, and can obtain diverses annotations in my genome from Augustus, GeneMark and Snap. Additionaly, i have a EST from a closed organims. My problem is that i have differente predictions of genes in fasta format, an a GFF file whit all thre pedictions.
My question is how to obtaing a consensu gene list of different evidences of marker.
There is someone who has worked with marker, could tell me how to get the list of genes and consensus sequences in fasta.
thank you very much