Entering edit mode
3.6 years ago
akshaykum684
▴
20
Hello Everyone,
I have a list of VCF files from specific ethnicity such as American Indian, Chinese, European etc
Under each ethnicity, I have around 100+ files.
Currently, I computed the VARIANT QC
metrics such as call_rate
, n_het
etc like below for one file
How can I do this across all files under a specific ethnicity?
Can help me with this?
Is there any python
or R
or Unix
approach to do this?