Closed:qsub in HPC
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3.6 years ago
kai_bio ▴ 50

I am relatively new to the HPC and was trying to figure out what the below command performs in HPC

qsub -q highmem.q -l h=node22 -pe smp 10 -N mRNAseq -hold_jid mapping -cwd bash.sh

I figured out the following

-q highmem.q : submit job to high memory queue

-pe smp 10: use parallel env smp and reserve 10 slots

-N mRNAseq: job name

-l h=node22 : use node22 (probably)

-cwd : In the current working directory

But not sure about the -hold_jid

Can anyone please let me know what the above command functions too?

Thanks in advance

hpc Assembly genome linux next-gen • 182 views
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