Question: detect and correct misassemblies in eucaryotic scaffolds
gravatar for Chvatil
27 days ago by
Chvatil50 wrote:

Hello everyone, I actually made several assembly of eukaryotic genomes and I found some missasemblies in the file by mapping reads against the fasta assembly file.

So I wondered if someone knew a performant tool in order to identify an correct misassemblies in scaffolds for eucaryotic genomes specially?

I know for instance REAPR from Sanger or MEC but I do not really know if there is no better tool for eucaryotic genome?

Thank you very much

assembly reapr mec • 83 views
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