detect and correct misassemblies in eucaryotic scaffolds
0
0
Entering edit mode
3.7 years ago
Chvatil ▴ 130

Hello everyone, I actually made several assembly of eukaryotic genomes and I found some missasemblies in the file by mapping reads against the fasta assembly file.

So I wondered if someone knew a performant tool in order to identify an correct misassemblies in scaffolds for eucaryotic genomes specially?

I know for instance REAPR from Sanger or MEC but I do not really know if there is no better tool for eucaryotic genome?

Thank you very much

reapr mec Assembly • 554 views
ADD COMMENT

Login before adding your answer.

Traffic: 1320 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6