Question: How to generate input wig files for HMMcopy R package?
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gravatar for monicasudarsanamm
26 days ago by
monicasudarsanamm20 wrote:

Hello everyone, I am trying to use the HMMcopy R package for low pass copy number analysis. HMMcopy needs .wig files as input for the analysis. Unfortunately, there is no documentation available about how to obtain these files. Can someone please provide any info about how to generate those wig files for HMMcopy. I have fastq files and i have already generated bam and sam files for those fastq files. Thanks in advance.

ADD COMMENTlink modified 26 days ago by ATpoint40k • written 26 days ago by monicasudarsanamm20
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