Interested in genome assembly using long-read data?
We will run two online training courses in the upcoming months:
Online, 9 – 13 November 2020
This course will introduce the audience to a spectre of methods which are present in a usual assembly workflow, starting from raw data and finishing with a fully assembled genome. We will see how to manipulate raw reads, analyse their quality, how to run different assembly algorithms, how to run Hi-C scaffolding algorithms and how to analyse assembly quality.
GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
Online, 22 – 26 February 2021
This course will introduce the audience with a spectre of methods which are present in a usual assembly workflow, starting from raw data and finishing with a fully assembled genome. We will see how to obtain nucleotide sequences from raw signals, dive deeper into the most used assembly paradigm for long fragments, try out and compare several state-of-the-art assemblers, and at last, assess the quality of the obtained assembly with and without a reference genome.
www.physalia-courses.org
