calculate mutual information between pairs of SNPs
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3.5 years ago

I have SNP data for 350 case and control subjects. I want to calculate the mutual information between each pair of SNPs. Do I have to encode my data since the values are in AA,CT form.? I tried using sklearn feature selection_mutualinfo but it finds mutual information between feature and the target vector and not between features. Please help me!!!

feature selection mutual information • 521 views
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