Error running gene expression based ProTINA
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Entering edit mode
3.4 years ago

Hello everyone

I am using github.com/CABSEL/ProTINA/tree/master/protina_R package in order to identify protein target from time series data gene expression data. In the background, it uses Protein-Gene interaction information. I installed all required libraries such as glmnet in order to run this tool perfectly. While doing the test run, I got following error

Inferring weights in PGN: ( 0.170)%
Error in coef.cv.glmnet(cvfit, s = "lambda.min") : 
  could not find function "coef.cv.glmnet"

Can anyone help me to fix this issue?

ProTINA Time-Series gene-expression • 568 views
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