Question: How can calculate the column of SNP in SNAPPY option (Wombat software)?
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gravatar for X.Y.Zebby
28 days ago by
X.Y.Zebby0
X.Y.Zebby0 wrote:

Hi friends,

I have to create a file that I put the contents below according to its manual.

104 3 21 321 2.0 15.0 237.6668

105 3 20 320 3.0 14.0 261.7078

108 3 21 321 2.0 15.0 236.7068

109 2 21 221 2.0 15.0 215.2132

113 3 20 320 1.0 11.0 187.5965

It has columns with the title of animal, kfix, mfix, kxl, snp, age, wgt, respectively.

Why the column of snp (i.e 5th) has 1, 2, or 3 numbers? How can I calculate it? My genotype codes are based on 1 and 2.

Thanks in advance.

snp chip-seq • 97 views
ADD COMMENTlink modified 13 days ago by Biostar ♦♦ 20 • written 28 days ago by X.Y.Zebby0
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