Plotting the results (p-values) from various conditional GWAS
1
0
Entering edit mode
4 months ago
sam.far.7 • 0

Hi, I am interested in presenting the various p-values for top SNPs resulted from different GWAS in one plot in order to show the common SNPs or differences in the results. Any suggestions for the type of plot?

GWAS PLOT • 224 views
ADD COMMENT
0
Entering edit mode
4 months ago
devarora ▴ 430

I believe there are different ways to represent significant results but I found circos in highlighting region of interest as one of the most interactive way as well as Manhattan plot for the same. I found these particular tools with well documented example and help forum to proceed in my work.

Circos

CMplot

ADD COMMENT

Login before adding your answer.

Traffic: 2063 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6