Determination the KO numbers for the genes
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6 months ago

Hello everyone, I would like to ask if there is any online tools to determine the KO numbers of the genes? For example, I want to know the list of KO numbers of my Acid and bile salts genes. Thank you in advanced.

KO number Genes Annotation KOFAMKoala • 266 views
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6 months ago

Look into KEGG by prior selection of your organism

If you have the protein sequences and cann't find the KO codes, look for BlastKoala which is a tool included into KEGG to annotate them

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Hello, @Antonio R.Franco...How about KOFAMkoala? Does the tool can help in determining KO numbers? And is the pathway that linked in the KOFAMKOALA help in determine KO numbers? Because now I have some list of genes that related to probiotic bacteria but then I dont have KO numbers in order to annotate them...For example, i do not have KO numbers for acid and bile salt protein..Thank youin advance.

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Of course. Give it a try

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