Closed:Error while using bowtie2
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3.3 years ago
Jimpix ▴ 10

Hello! After typing command below:

bowtie2 -x Sequence/Bowtie2Index/genome -1 A1.fastq -2 A2.fastq -S A.sam

I've got an error:

Error, fewer reads in file specified with -2 than in file specified with -1
terminate called after throwing an instance of 'int'
Aborted (core dumped)
(ERR): bowtie2-align exited with value 134

Can someone give some advices?

bowtie2 error • 133 views
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