Chicken insulators or CTCF binding sites
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11 weeks ago
rrapopor ▴ 10

Hello,

I'm looking for a list of chicken (Gallus) insulators or CTCF binding sites. I couldn't find anything useful in Google. http://insulatordb.uthsc.edu/ have only 10 regions for chicken.

I would appreciate any help.

Thanks!

insulators ChIP-Seq gene • 146 views
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Your best shot is probably to scan for CTCF datasets in your species, e.g. via sra-explorer.info and then see whether they provide the binding sites. If not you can still download and process the data yourself.

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Thank you! That is what I did eventually, and I found a published list gallous CTCF peaks

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