I downloaded SRA toolkit and read documents about installing it but i cant install it yet. what is the next step after downloading SRA toolkit? please help me.
I downloaded SRA toolkit and read documents about installing it but i cant install it yet.
You will have to be more descriptive than that if you expect help.
https://github.com/ncbi/sra-tools/wiki/02.-Installing-SRA-Toolkit
There are precompiled binaries for all major operating systems available from the NCBI download page. There is no need to "install" in terms of compile anything.
=> Alternatively, search for your data at sra-explorer.info and download it directly with the generated download links as fastq either via ftp or Aspera. That is way less of a pain than fiddling with the awful sratoolkit.
sra-explorer : find SRA and FastQ download URLs in a couple of clicks
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version 2.3.6
I want to install SRA toolkit on win 10 and convert for example SRR066194.3 to fastq format. but in first step cofronted with this error: 'Downloads:\' is not recognized as an internal or external command, operable program or batch file. I searched and found that maybe SRA toolkit isnt be installed. so I asked what is the next step after Downloading SRA toolkit?
I recommend you do it in a unix system.