How can I add additional annotations like the gwas db or omim db to the output of summarizeannovar.pl either as an option for that script or after the output is already generated? Either way, I want these databases added to my annotated variant list from the summarizeannovar.pl script.
Also, I need to convert my output file generated from Annovar back into the VCF format. I have not seen anywhere on the Annovar page about doing this, so would I need to manually do it?
Any help would be much appreciated.