How To Check Structure Variation In Igv Or Other Tools?

Question

[C Shao]

I found many structure variations in the genome sequencing data by breakdancer. Now I am trying to evaluate them visually.

However, the breakdancer seems not to provide information on which pair of reads support the translocation, or other SV. For the information provided by IGV, they are many reads on the interested region.

How do you check the SV in IGV or other genome browser?

Thanks.

[Pierre Lindenbaum]

duplicate of best genome browser to look at structural variation calls

Answer 1

[Istvan Albert]

As Pierre said it is a duplicate of best genome browser to look at structural variation calls

I just like to see these as answers not just comments ;-)

[C Shao]

Yes, and I think I have deleted my post. Wired.