I want to find core genome of around 30 bacterial genomes. For that I have Installed NCBI-BLAST package from NCBI FTP site using ncbi-blast-2.2.27+-win64.exe I have set environment variable PATH="C:\Program Files\NCBI\blast-2.2.27+\bin". Still it is not running the commands formatdb -i 1.txt -p F -o F and blastall -p tblastx -d 1.txt -i 2.txt -o 1vs2.txt -m 8 -a 3
What else do I need to do to accomplish the task? Thanks in advance.