I am using pymol to display a protein complex with 3 chains:
- Two chains in cartoon mode (one with 800 residues and the other one with 300 residues).
- The third chain in surface representation (300 residues).
I have also highlighted some specific residues in the display.
The problem is that I have saved it as a pymol session (.pse) file and the size of the file is around 3 M.
Do you know how to reduce the file size? I have tried removing some atoms but I will loose the cartoon (secondary structure) representations.
Thanks inadvance for the help.
P.S. If you are wondering why i need to reduce the size is because i want to use JSMOL to be able to show this model on mobile phones and since 3M is large it takes a while to load the figure. I would like to make it faster.