Question: Zero Trace error running Eigenstrat 5
0
gravatar for alberto.montesanto
6.3 years ago by
alberto.montesanto0 wrote:

I'm trying to run EIGENSTRAT 5 on my PC. After a successful installation I tried to carry out a PCA on my genetic dataset. I encountered the following problem: fatalx XTX has zero trace (perhaps no data). Can anyone help me?

pca genetics • 2.0k views
ADD COMMENTlink modified 5 months ago by Baoxu0 • written 6.3 years ago by alberto.montesanto0
0
gravatar for ShirleyDai
3.2 years ago by
ShirleyDai40
ShirleyDai40 wrote:

Hi, Have you solve this problem yet? I came across the same error.

ADD COMMENTlink written 3.2 years ago by ShirleyDai40
0
gravatar for Baoxu
5 months ago by
Baoxu0
China/Changchun/Northeast Nomal University
Baoxu0 wrote:

I encounter same problem: here's mistakes I made: the smartpca need 3 files (ind snp genols) files , check the snp files and make sure the style of chr name is right. (e.g. chr1 chr2 ) because I use Mt chr1A names and smartpca can not recognize them

ADD COMMENTlink written 5 months ago by Baoxu0
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