Mapping Kegg Ids In Gostats

Question

[Radhouane Aniba]

Hello everyone,

I am trying to adapt a script found on internet for using GOstats.

There is one line after a HyperG test was done that is :

goMaps <- lapply(out$GOBPID, function(x) unlist(mget(x, org.Gg.egGO2ALLEGS)))

That's for Mapping GO IDs, what shall I use instead of org.Gg.egGO2ALLEGS for mapping KEGG IDs ?

Thank you

Answer 1

[Radhouane Aniba]

All right found it

keggMaps <- lapply(outK$KEGGID, function(x) unlist(mget(x, org.Gg.egPATH2EG)))