Best assembly program for mitochondrion?
1
0
Entering edit mode
6 weeks ago
zhousun21 ▴ 20

Hi all,

Can anyone suggest a good program for mito assembly?

I've tried NovoPlasty bit it throws errors on installation. (others have reported the error but it persists.)

I'm also having trouble using GetOrganelle to run due to python problems.

Can anyone suggest an alternative?

TIA.

mitochondrion assembly mito organelle • 176 views
ADD COMMENT
0
Entering edit mode

Novoplasty should run just fine if you ├Čnstall it via conda. What kind of sequencing data do you have?

ADD REPLY
0
Entering edit mode
6 weeks ago
pramach1 • 0

I have used Mitobim. It has worked well for me in the past.

ADD COMMENT

Login before adding your answer.

Traffic: 2658 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6