Looking for both RNA-Seq and Single Cell RNA-Seq data collected from the the same individuals
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3.1 years ago

Is there any way to download both RNA-Seq and Single Cell RNA-Seq (scRNA-seq) data collected from the same individuals (preferably in ExpressionSet format)? I am aware of this post but those pages refer to scRNA-seq data only.

scRNA-seq RNASeq • 1.3k views
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3.1 years ago
Zhenyu Zhang ★ 1.2k

GDC has a few (in CPTAC-3 project)

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Many thanks.

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3.1 years ago
EagleEye 7.6k

Check out this recent publication, they used both bulk and scRNA-seq (I am not sure if it is from same individuals). If you read in details, you will able to find out. Hope this helps.

The coding and long noncoding single-cell atlas of the developing human fetal striatum http://doi.org/10.1126/science.abf5759

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Many thanks.

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