Due to limited repository, I have to remove data after sequencing analysis. I think FASTQ and some BAMs have to remain. But I don't know which one to leave for storing, especially BAMs.
These are what I have in targeted WES. Is it right way to removing all files except that .bam, .recal.sorted.bam, *.recal.sorted.bam.bed.pileup ? If there is a recommended way, please advise me.