I have nanopra sequencing data that include 3.6GB of Fasta file. After long-read assembly via Canu and Flya was resulted very different number of contings. There are 1132 coatings (22Mb) for Canu and 8677 contings (600Mb) for Flye. The genome size of the sample I am interested in is approximately 600 Megabase.
I'm trying to figure out why the results are so different. Thank you for your help