cnvkit genemetrics --ttest
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Entering edit mode
4 months ago
wanziyi89 ▴ 60

Hi,

I am trying out the cnvkit genemetrics function. When I check the help file with

cnvkit.py genemetrics -h

, there is a whole range of statistical output options available such as --ttest.

How do we get the output for this T-test? I tried :

cnvkit.py genemetrics input.cnr -o output.txt --ttest

The output I got is the same as without --ttest.

ffpe oncology cnv cnvkit cna • 158 views
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