EnsemblVEP could not generate any output for a list of frameshift insertion input
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Entering edit mode
11 weeks ago

Dear all,

I am trying to use EnsemblVEP for a list of FrameShiftInsertions.

However, VEP produces empty tables.

The header of my input:

22  41257114    41257115    -/T +
1   237540701   237540702   -/CA    +
2   71592562    71592563    -/A +
4   68379975    68379976    -/T +
17  77808750    77808751    -/G +
1   185986178   185986179   -/C +
2   21231201    21231202    -/A +

Can anybody help me to solve this problem?

Regards

Nazanin

Frame_Shift_Insertion EnsemblVEP • 131 views
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0
Entering edit mode
11 weeks ago

Hi every one!

I found the solution.

With replacing the "Start" and the "End" columns with each other, VEP produced the result.

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