Plink extracting individuals based on certain SNPs
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2.8 years ago
Ruby • 0

Hello!

This is my first time posting here so bare with!

I'm currently doing my Masters degree and using plink, so I have my bed, bim, map files and have already done a lot of analysis using these so I know theyre all good! But my next task is to extract a group of individuals who have certain SNPs then I will be able to check their ID against my database and see the their individual phenotypes..

I was initially going to so about this using awk but after looking at the data management toolset on the plink site I'm not sure if this is the best way?? Any advice is totally welcome!

Sorry if this isnt explained great!

Plink genotypes SNP • 362 views
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