How do I start clue GO in R using the cytoscape REST API?
1
0
Entering edit mode
3.3 years ago
gt ▴ 30

Hi there, I am trying to connect to open the Clue GO application in R using cytoscape REST API. I have the following code:

port.number = 1234
host.address <- "localhost"
cytoscape.base.url = paste("http://",host.address,":", toString(port.number), "/v3.11.1", sep="")
response <- POST(url=paste(cytoscape.base.url,"apps","cluego","start-up-cluego",sep="/"), encode = "json")

which should open Clue GO in my cytoscape session. However, when I look at response I get the following error:

Response [http://localhost:1234/apps/cluego/start-up-cluego]
  Date: 2021-08-20 19:15
  Status: 404
  Content-Type: text/html;charset=iso-8859-1
  Size: 344 B
<html>
<head>
<meta http-equiv="Content-Type" content="text/html;charset=utf-8"/>
<title>Error 404 Not Found</title>
</head>
<body><h2>HTTP ERROR 404</h2>
<p>Problem accessing /apps/cluego/start-up-cluego. Reason:
<pre>    Not Found</pre></p><hr><a href="http://eclipse.org/jetty">Powered by Jetty:// 9.4.12.v20180830</a><hr/>

</body>

the v3.11.1 corresponds to the version of cyREST that I have. I am not really sure why it is not opening Clue GO. Any suggestions?

API R cytoscape REST ClueGO • 857 views
ADD COMMENT

Login before adding your answer.

Traffic: 3073 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6