I have RNAseq data of non-model organisms, which I'm planning to analyze by de novo assembly with Trinity and write a paper on.
The RNAseq paper contains basic statistics(for example, Total raw reads, Number of gene and Assembly N50 etc). Are there any rules for these parameters? I'm a beginner in bioinformatics, so I don't know what parameters are required. Can you please advise me?
Thank you very much for your much appreciated help on this!