Gene coordinates for hg19
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5 weeks ago
paolo • 0

Hi,

is there a list which gives for each gene its starting coordinate (chr:pos) and its ending one with respect to the hg19 reference genome?

I have a list of positions on hg19 expressed as chr:pos and I have to assign each one to the gene it belongs to.

GRCh37 hg19 • 305 views
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5 weeks ago
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Specifically annotation file: http://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_19/gencode.v19.annotation.gtf.gz

Look for gene features if that is all you are interested in.

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Thank you to both of you, this was what I was searching for!