Entering edit mode
2.5 years ago
rheab1230
▴
140
Hello,
I am trying to use predictdb tutorial. The link is: https://github.com/hakyimlab/PredictDB-Tutorial
When I run gtex_tiss_chrom.R
script, it throws an error
Error in file(file, "rt") : cannot open the connection
Calls: main ...get_filtered_snp_annot -> %>% -> distinct -> filter -> read.table -> file
In addition: Warning message:
In file(file, "rt") :
cannot open file '/home/data_download/train/output_predictdb/snp_annot.chrNA.txt': No such file or directory
Execution halted
(train)
I checked this directory. It has those files.
But still getting this error.