Entering edit mode
2.4 years ago
ramin.k2013
•
0
I was trying to build a kraken database; however, I faced some challenges. I tried both the kraken standard database and custom database building procedures (according to the tutorial), but I receive a same error anyway in adding libraries phase:
rsync: change_dir "/refseq/bacteria" (in genomes) failed: No such file or directory (2)
rsync error: some files/attrs were not transferred (see previous errors) (code 23) at main.c(1816) [Receiver=3.2.3]
For standard database I execute this command:
kraken2-build --standard --db myDB
==> error
For custom database I execute these commands:
kraken2-build --download-taxonomy --db myDB
==> run successfullykraken2-build --download-library bacteria --db myDB
==> error