I would like to run monocle 2 on my dataset that is 130 000 cells. I have been able to convert my seurat object to a CDS using: as.CellDataSet function. When trying to orderCells: I am getting this error:
Object_CDS <- orderCells(Object_CDS) Error in graph.adjacency.dense(adjmatrix, mode = mode, weighted = weighted, : long vectors not supported yet: ../../src/include/Rinlinedfuns.h:537 Calls: orderCells ... project2MST -> graph.adjacency -> graph.adjacency.dense
Could you please help me with that issue ?