Question: Ucsc Mm10 Mouse Gap Table Has The Same Centromere Coordinates
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gravatar for lahat.albert
5.2 years ago by
lahat.albert60
United Kingdom
lahat.albert60 wrote:

I need centromeric location for mouse (mm10). Tried using data from ucsc gap tables but the informataion does not seem acurate:

9 chr1 110000 3000000 3 N 2890000 centromere no

9 chr2 110000 3000000 3 N 2890000 centromere no

9 chr3 110000 3000000 3 N 2890000 centromere no

9 chr4 110000 3000000 3 N 2890000 centromere no

9 chr5 110000 3000000 3 N 2890000 centromere no ... (third and forth row are start and end)

mm8 and mm9 also have similar centromeric information. Is there anywhere else where I can get that information?

ucsc • 2.2k views
ADD COMMENTlink modified 3.3 years ago by Biostar ♦♦ 20 • written 5.2 years ago by lahat.albert60
3

Mice do have telocentric chromosomes, so...

ADD REPLYlink written 5.2 years ago by Devon Ryan90k

Thank you, I actually was not expecting the solution to be that simple.

ADD REPLYlink written 5.2 years ago by lahat.albert60
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