does bioconductor/bioconductor_docker:RELEASE_X_Y install CRAN packages from a fixed snapshot?

2

Entering edit mode

2.2 years ago

mk ▴ 290

Question:

Does a container instantiated from bioconductor_docker:RELEASE_X_Y also pull CRAN packages from reproducible image (e.g. via MRAN) and if not how do I accomplish this?

Motivation:

I'm building an image with both Bioconductor and CRAN packages and want versions of both repositories pinned to a specific date.

Background:

The Bioconductor docker documentation mentions rocker/rstudio.

However, unlike rocker/r-ver, the above images do not seem to be pinned to any reproducible CRAN image (e.g. MRAN in the case of rocker/r-ver)

NB: this question is cross-posted on stack here

R Bioconductor docker • 600 views

ADD COMMENT • link 2.2 years ago by mk ▴ 290

0

Entering edit mode

Bioconductor has its own biostars forum https://support.bioconductor.org/

ADD REPLY • link 2.2 years ago by Jeremy Leipzig 22k

0

Entering edit mode

thanks! I'll add this question there as well.

ADD REPLY • link 2.2 years ago by mk ▴ 290

Login before adding your answer.