Easy way to calculate frequencies in Plink
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2.1 years ago
alessandro • 0

If I have a list of ID's and groups like this

I0781  Bulgaria_C_0
I0785  Bulgaria_C_0
I0786  Bulgaria_C_1
I0787  Bulgaria_C_1

Is there a way to calculate frequencies in Plink based on Populations (Bulgaria_C_0 and Bulgaria_C_1) without recurring to create multiples files for --keep option and obtain a .frq file for each population?

plink list frecuencies bash • 268 views
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