Entering edit mode
2.1 years ago
Giulia.cosenza
▴
100
I want to calculate the frequency or recombination between SNPs. I have the list of SNPs coordinates, and the 1000G_genomic_map_files for each chromosome.
But what if there is not the position of one of my snps in the 1000G_genomic_map_file? How can I calculate its centimorgan distance?
Let's say I have to calculate the distance in centimorgan between this two snps:
chr1:4114126
chr1:4158955
And in the map file I only have this positions and centimorgan:
chr1:2831369 5.443888
chr1:4158955 9.838158
Is there a way to calculate the distance between the 2 snps?
