I am trying to get the BAM files from these SRA accessions
https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR1187911 https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR1045127
I have tried to download these both to our lab server and Stony Brook's cluster, and I get these same errors
[Vyas@sahara test]$ aws s3 ls --no-sign-request s3://sra-pub-src-5/SRR1187911
An error occurred (AccessDenied) when calling the ListObjectsV2 operation: Access Denied
[Vyas@sahara test]$ aws s3 ls --no-sign-request s3://sra-pub-src-10/SRR1045127
An error occurred (AccessDenied) when calling the ListObjectsV2 operation: Access Denied
Not sure what is going on... Anyone have an idea?
It is not a question of the tools. I don't think it is possible to download "original format" data (in this case BAM files that are available under the "Data Access" tab) using the tools you mention.