Deleted:How to make pan-core genome curve through command line on linux?
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23 months ago

I´m working with a dataset of 566 genomes to analyze a pangenome. So I was working with PANWEB to create this pan core genome curve, however, there is too much sequence to work with this webserver. Well, specifically I´m looking for this kind of plot:

enter image description here

So, I just want to ask for some ideas of programs to do that with a big dataset and with a command line.

Here is the reference: https://www.researchgate.net/figure/Pan-genome-and-core-genome-Graph-representing-the-pan-genome-blue-and-core-genome_fig1_317390138

pangenome metagenomics • 255 views
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