I'm currently trying to do heatmap of selected gene expression through my pseudotime.
What I have done currently , is to first create a dataframe with my cells and gene expression value. Then I have order my cells based on my pseudotime.
Now I can plot my heatmap, but the problem is that I don't have the clusters of reference for my cells. I don't know how I can integrate it into my heatmap.
Here is what I want to do :
Thank you very much