VQSR bias against rare variants
0
1
Entering edit mode
7 weeks ago
drabiza1 ▴ 20

I read that VQSR is inherently biased toward filtering out variants that are very rare (ie, only encountered once in the analyzed data set).

Can someone explain why that is the case.

GATK variant VQSR callling • 189 views
ADD COMMENT

Login before adding your answer.

Traffic: 579 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6